Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015860772.1_cds_XP_016514734.1_27154
CDS Infomation

[gene=LOC107831480] [db_xref=GeneID:107831480] [protein=probable ATP-dependent DNA helicase DDX11 isoform X2] [protein_id=XP_016514734.1] [location=join(14949..15072,15932..16567,16668..16765,17232..17585,17733..18026,18119..18364,18455..18676,18897..19467,19733..19743)] [gbkey=CDS]
Sequence

ATGGAAGAGAGAAGAGAATTTCCGGCATTTCCATACGAGGTCTACTCCATTCAGCTTGAT
TTCATGAACGCCCTTTACCATTCCCTCAATAAAGGCGGTGTTGCCATGCTAGAAAGCCCC
ACTGGCACTGGTAAAACGCTCAGTATAATTTGTAGTGCCCTTCAATGGCTTCTTGATAGA
AAGCAACAACAGAAAACACAATCGGGGTCTACTTCAAATTTAGGTGGAAAACAAGAAGAT
TATTTGGGGGCTGACGATGAACCAGATTGGATGAGGAACTTTGTCATTAACAAAGACGCA
AAATCGCCCGAGAAGAAGACAAAGGAAAAAAGGCAATTGGGATTCAACAAAAAAATTGAT
AGGAAGGGAAAAAGGGAAATTGTTAGAGATTTAATTACTAACGAGGGTGGGAAGGAGGAA
GATATTGAGATTGAAAAGGTAAACAATTTAATGGCAAAACATGAGGTTGAGGGAATGGAT
GAAGAGGAGTTTTTGGTTGAAGAGTATGAGAGTGAAGATGAAAATGGAGGACAATCTAAA
AGGAAGGGTGGTGGGGTTTCGGTTAATTCCTCGAGTGAGGAAGAAAAGAACGAAGATAGC
ATGGAAGATGAGGAGGAAGAGGCTAGACCCAAGATTTACTTTTGCAGCCGAACACATTCA
CAACTTTCACAATTTGTAAAGGAGTTAAGGAAGAGTAAATTTGCTGGTGAAGTGAAGGTT
GTATGCTTAGGGTCTAGGAAGAATTTCTGCATTAATCAAGAGGTGTTGAAGCTAGGCAAC
CCCACTCAGATAAATGAGAGATGTTTGGAGCTTCAGAAAAATAGGAAGAAAGAAAATTCT
AAAATATCTAAAACCAAGAACATCGGAGCTGTTGGCAGAGCGAGGAGGTCCAAGACTTCC
TCAGGGTGCCCAATGCTTAAAAATCACAAAAGAGGAAAAGAATTCCGAAGTGAGGTTTCT
CAACAAGGGCCAGTGGATATTGAGGATCTTGTTCAGATTGGACGTGACTTGAAAACTTGC
CCTTACTATGGTTCAAGAAGCCTGGTACACACAGCGGATCTTGTGGTTCTTCCTTATCAA
TCTCTTCTTTCAAAATCATCACGTGAATCACTTGGTTTAAGTCTAAAAGATAGTGTTGTT
ATCATAGATGAAGCTCATAATTTAGCTGATTCTCTCGTCAGCATGTACGACTCAAAAATT
ACATTGTCACAGTTGGAACTTGTGCATTCTCACTTGGAGAGTTACTTCATACGGTTTCGC
AATCTGTTAGGGCCAGGCAACCGCAGGTATATTCAAATAATCATGGTCCTTACTCGGGCT
TTCCTACAAGCTTTGGGTAGTGAGAATTGTCAAAGCAGCTTTGACCCCGTTTATAATGCT
GAGGGAAGTAAAAGTGGCTTTGATTCATCCATGTCCATAAACGAGTTCCTATTTGCCCAC
AATATTGACAACATAAACCTGTTTAAGCTCTTGCGGTATATAGAAGAAAGCAATATAATT
CACAAGGTATGTGGATATGGACATAAATTAGCTCTCTCAGAAGAAGTTTCAGCATTGAAA
AATGACGACAAAGTCAGTCATGATGAAAGTGCATTATCTGGTTTCCGAGCATTAGTTAAC
ATATTACTGTCACTAACAAATAGAGATGGTGATGGAAGAATAATAATATCAAGGACAAGG
CCAAAATGCCCCAAGCAACAAGGAGGGTACTTGAAATATGTCATGCTCACAGGAGAAAGG
ATATTTTCTGAGGTCCTCAATGAAGCTCATGCTGTCATATTGGCTGGTGGGACTTTGCAA
CCCATAGAGGAAACAAAAGAACGCCTGTTTCCTTGGTTACCGCTGGATCAGTTGCATTTA
TTTTCATGTGGTCATATCATCCCACCTGAAAATATTCTACCAATTGTCGTTTCTCAAGGG
CCTTCTCGCCACTCCTTTGATTTTAGTTACAGTGCCAGAAGCTCATCAATCATGATACAA
GAATTAGGGCTTTTGGTCTCCAATTTGGTAAATGTAGTTCCTGAAGGCATGGTTATTTTC
TTCTCATCATTTGACTACGAAGGCCAGGTCTATGATGCATGGAAGGAGTTGGGCATCATT
GGAAGAATTATGAAAAGGAAGCGTATATTTAGAGAACCTAGAAAAAGTACAGATGTGGAA
ATTGTTTTAAAGGAATACAAGGAAACAATTGAAGCACTGTCTCATAGCAGTTCTAAGCAG
GACCCTGGATCACGCAACGGTGCAATTCTCCTCGCTATTGTGGGTGGGAAAGTATCAGAA
GGTATCAACTTCAGCAATGGGATGGGTCGATGCATAGTCATGGTTGGATTGCCCTATCCT
AGTCCAGCTGACATCGAGTTGATGGAGAGAATTAAGCATATTGAAGGATTTGATACTTCT
AGTGGTAAGAACACCAAATTTCAGTCTCCAAGGAGCTGGTATAGCGGAGATGCTCAAGCT
GGGCTTGACATCCTAAAAAGCTGCAAGCATAGAGGGAAGCAGTATTATGAGAATCTTTGC
ATGAAAGCTGTTAATCAATCAATTGTGCTGTTTTAA

Peptide Sequence

PEP ID

XP_016514734.1
PEP Infomation

PREDICTED: probable ATP-dependent DNA helicase DDX11 isoform X2 [Nicotiana tabacum]
Sequence

MEERREFPAFPYEVYSIQLDFMNALYHSLNKGGVAMLESPTGTGKTLSIICSALQWLLDR
KQQQKTQSGSTSNLGGKQEDYLGADDEPDWMRNFVINKDAKSPEKKTKEKRQLGFNKKID
RKGKREIVRDLITNEGGKEEDIEIEKVNNLMAKHEVEGMDEEEFLVEEYESEDENGGQSK
RKGGGVSVNSSSEEEKNEDSMEDEEEEARPKIYFCSRTHSQLSQFVKELRKSKFAGEVKV
VCLGSRKNFCINQEVLKLGNPTQINERCLELQKNRKKENSKISKTKNIGAVGRARRSKTS
SGCPMLKNHKRGKEFRSEVSQQGPVDIEDLVQIGRDLKTCPYYGSRSLVHTADLVVLPYQ
SLLSKSSRESLGLSLKDSVVIIDEAHNLADSLVSMYDSKITLSQLELVHSHLESYFIRFR
NLLGPGNRRYIQIIMVLTRAFLQALGSENCQSSFDPVYNAEGSKSGFDSSMSINEFLFAH
NIDNINLFKLLRYIEESNIIHKVCGYGHKLALSEEVSALKNDDKVSHDESALSGFRALVN
ILLSLTNRDGDGRIIISRTRPKCPKQQGGYLKYVMLTGERIFSEVLNEAHAVILAGGTLQ
PIEETKERLFPWLPLDQLHLFSCGHIIPPENILPIVVSQGPSRHSFDFSYSARSSSIMIQ
ELGLLVSNLVNVVPEGMVIFFSSFDYEGQVYDAWKELGIIGRIMKRKRIFREPRKSTDVE
IVLKEYKETIEALSHSSSKQDPGSRNGAILLAIVGGKVSEGINFSNGMGRCIVMVGLPYP
SPADIELMERIKHIEGFDTSSGKNTKFQSPRSWYSGDAQAGLDILKSCKHRGKQYYENLC
MKAVNQSIVLF

Transcript Sequence

Gene sequence data has not been registered.